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(Last modification: 25. August 2010)

 

Valerophenonsynthase (VPS)

 

     Humulus lupulus (hop, Hopfen, gehört zu den Hanfgewächsen, Cannabaceae) wird seit mehreren Jahrhunderten in der Herstellung von Bier verwendet. Der ursprüngliche Grund war nicht der Geschmack, wie häufig angenommen, sondern die stabilisierende Wirkung durch die Bittersäuren in den Fruchtständen. Hopfen hatte sich dann etwa im 13. Jahrhundert als das Beste durchgesetzt. In England jedoch dauerte es weitere 200 Jahre bis Hopfen als die beste Wahl akzeptiert wurde; davor wurde er anscheinend als 'wicked and pernicious weed' verunglimpft (etwa so: bösartiges und hartnäckiges Unkraut). Das Bayerische Reinheitsgebot von 1516 legte dann fest, dass in Deutschland nur Hopfen verwendet werden durfte. Eine interessante Zusammenfassung findet sich in einem 'Millenium Review' (Moir, 2000). Wikipedia erzählt auch etwas über Hopfen, und führt auch zu einigen guten Bildern. Der deutsche Artikel ist besser als der englische, aber in beiden Fällen lässt die Beschreibung der Naturstoffe viel zu wünschen übrig. Humulon und Lupulon, die beiden uns hier interessierenden Naturstoffe, werden gar nicht besprochen (Vorsicht, bitte aufpassen: Nicht Humulon mit dem dort erwähnten Humulen verwechseln. Humulen ist ein Sesquiterpen, und wird nicht über eine PKS-Reaktion gebildet!).
     Humulon und Lupulon sind die vorherrschenden Bitterstoffe in den Fruchtständen, und bereits 1994 wurde vorgeschlagen, dass eine CHS-Typ Reaktion in der Biosynthese des Grundgerüstes beteiligt ist (ganz schön clever: Würden Sie in Humulon das Wirken einer CHS-Typ Reaktion erkennen?). Startersubstrate sollten Isovaleryl-CoA (-> Humulon) und Isobutyryl-CoA (-> Lupulon) sein (Fung et al., 1994). Bereits ein Jahr danach wurde die vorgesagte Enzymaktivität in vitro gezeigt(Zuurbier et al., 1995), aber die völlige Reinigung des Enzyms und die Mikrosequenzierung von Peptide dauerte etwas länger: Die Sequenzen zeigten klare Verwandtschaft mit den damals bekannten Chalconsynthasen (CHS) (Paniego et al., 1999). Das Enzym wurde dann als Valerophenonsynthase (VPS) bezeichnet, nach dem vorzugsweise verwendeten Substrat. Die Abbildung zeigt das Prinzip der Reaktion und das Endprodukt, Humulon.

 

 Reaktion von Valerophenonsynthase (VPS)

Valerophenonsynthase (VPS) in Hopfen (Humulus lupulus): eine Typ III PKS.

Die Farben () geben die Kondensationsreaktionen an und die C-Atome, die durch die drei Kondensations-Reaktionen eingeführt werden. Das hier gezeigte Beispiel ist mit Isovaleryl-CoA als Startersubstrat der PKS-Reaktion. Humulon ist das Endprodukt nach mehreren Modifikationen (gestrichelter Pfeil). Lupulone ist das entsprechende Produkt aus Isobutyryl-CoA. Grün: Prenylrest-Seitenketten.

 

     Der Vorschlag für ein CHS-verwandtes Protein passte zu den Ergebnissen mit einer echten CHS (aus der Kiefer, Pinus sylvestris) mit Isovaleryl-CoA als Substrat: Die CHS konnte die vorgesagte Reaktion durchführen, aber nicht perfekt, denn die Mehrheit der Produkte waren die Pyrone von nur zwei Kondensations-Reaktionen (Zuurbier et al., 1998).
     Die erste VPS cDNA wurde in 2001 publiziert (Okada and Ito, 2001), und wenig später wurde eine CHS cDNA beschrieben (Matousek et al., 2002). Von den oben erwähnten Ergebnissen mit einer 'echten' CHS hätte man raten können, was dann passierte: Offensichtlich war es nicht so einfach, die beiden Aktivitäten klar zu unterscheiden. Denn nicht nur die CHS hatte VPS-Aktivität, sondern die VPS konnte auch als CHS funktionieren, und so wurde dann zu der Zeit vorgeschlagen, dass ein Enzym sowohl den Weg zu den Bitterstoffen als auch zu den Chalconen (Flavonoide) bedient (Okada et al., 2001). Eine spätere Untersuchung berichtete, dass zwei der fünf analysierten Typ III PKS sowohl CHS als auch VPS-Aktivitäten in vitro hatten. Es wurde dann vorgeschlagen, dass das Enzym mit der höheren VPS-Aktivität hauptsächlich zu der Biosynthese der Bitterstoffe beiträgt, während das Protein mit höherer CHS-Aktivität wohl das Hauptenzym für die Flavonoid-Biosynthese ist (Okada et al., 2004).  In einem solchen Fall ist es wohl nicht gut möglich, eine physiologische Rolle aus in vitro Experimenten abzuleiten; man benötigt dafür ganz andere Ansätze.

 


 

Orphan VPS

      In diesem Zusammenhang ist es bemerkenswert, dass cDNAs für Proteine mit VPS-Aktivität auch aus anderen Pflanzen kloniert wurden. Eine ganze Serie von Typ III PKS erhielt man aus der einfachsten vaskulären Pflanze Psilotum nudum. Die Untersuchungen mit rekombinanten Proteinen ergaben Enzyme mit CHS, Stilbensynthase (STS), und VPS Aktivitäten (Yamazaki et al., 2001). Die Bedeutung der STS und VPS Aktivitäten bleibt mysteriös, denn in der Pflanze sind überhaupt keine Naturstoffe bekannt, die von solchen Reaktionen stammen, oder abgeleitet werden können. Beim gegenwärtigen Kenntniss-Stand sollten diese Enzyme als 'Orphan PKS' bezeichnet werden, da die physiologische Rolle völlig unklar ist.

     Ein anderes solches Beispiel ist eine cDNA aus dem Hanf (Cannabis sativa). Das Protein hatte CHS und VPS-Aktivität, und war 94% identisch mit einer der 'CHS' aus dem Hopfen  (Raharjo et al., 2004). Die grosse Ähnlichkeit lässt sich vielleicht damit erklären, dass Hanf und Hopfen der gleichen Familie angehören (Cannabaceae).

     Zusammenfassend, wie bereits oben bemerkt: Enzymteste in vitro haben offensichtlich nur sehr begrenzten Wert zur Definition der 'wirklichen' Substrate, wenn diese praktisch von jeder beliebigen CHS akzeptiert werden (mehr...) . Bereits 1983 wurde mit der CHS von Petersilie gezeigt, dass CoA-Ester von kurzkettigen Fettsäuren excellente Substrate für CHS sind ( Schüz et al. 1983).

 

Links zu anderen Beispielen von 'Orphan PKS'

 

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Zitate

    • Fung, S.-Y., Brussee, J., Van der Hoeven, R. A. M., Niessen, W. M. A., Scheffer, J. J. C., Verpoorte, R., 1994. Analysis of proposed aromatic precursors of hop bitter acids. Journal of Natural Products 57, 452-459.
      Four proposed precursors ofhop bitter acids, 2-acyl-1,3,5-benzenetriol and 2-acyl-4-(3-methyl-2-butenyl)-1,3,5-benzenetriol (acyl = methylpropanoyl or 3-methylbutanoyl), were synthesized (compounds 7-10). TIC, hplc and gc systems were developed for the analysis of these compounds in the presence of the hop bitter acids 1-6. All four precursors were found to be present in cone extracts of several hop cultivars.
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    • Matousek, J., Novák, P., Bríza, J., Patzak, J., Niedermeierová, H., 2002. Cloning and characterisation of chs-specific DNA and cDNA sequences from hop (Humulus lupulus L.). Plant Science 162, 1007-1018.
      A complete sequence of chalcone synthase (CHS) gene from hop was cloned. The gene designated chs_H1 consists of two exons and one 187 bp intron. CHS protein predicted from chs_H1 cDNA has 42.5 kDa and retains conserved domains and residues including 26 amino acids at positions identical to those identified by crystallography as characteristic for catalytic domains of alfalfa CHS (EC 2.3.1.74). Cloned CHS_H1 protein shows specific CHS activity with 4-coumaroyl-CoA. Structure modelling revealed clear differences between CHS_H1 and phlorisovalerophenone synthase, the only published CHS-like homologue from hop. Conserved motifs like H, and G boxes characteristic for the light regulated and stress inducible genes were identified within promoter region of chs_H1 gene. Highly specific expression of chs_H1 mRNA was detected by quantitative RT PCR in glandular trichomes during cone maturation. Much lower, but significant levels of chs_H1 mRNA were detected at the stage of hop flowering in petioles (100%), developed flowers (96%), and in stem apexes (78%), while the lowest levels of mRNA were found in the roots (31%) and leaf blades (9%). Southern blot analyses predicted at least five additional chs-like genes related to chs_H1. A genomic arrangement different from phlorisovalerophenone synthase sequences was found for these genes. RFLP analyses using DNA from 15 genotypes revealed several distinct dendrogram clusters, suggesting specific re-arrangements of hop chs-like genes during evolution and/or during the breeding and selection processes.
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    • Moir, M., 2000. Hops - A millennium review. Journal of the American Society of Brewing Chemists 58, 131-146.
      Of all the herbs that have been used to flavor and preserve beer over the ages, only the hop (Humulus lupulus L.) is now regarded as an essential raw material in brewing throughout the world. Although hops were cultivated in Babylon as far back as 200 A.D., there is no record of their use to make beer until about 1079. The value of hops for flavor and preservation of alcoholic beverages appears to have been recognized by the twelfth century, and, in the thirteenth century, the hop started to threaten traditional herbs, such as rosemary, yarrow, coriander, and bog myrtle. The Bavarian Purity Law of 1516 decreed that only hops could be used for bittering beers in Germany. For a long time, sweet and strong ales were preferred in England, and the hop was condemned as a 'wicked and pernicious weed.' Good sense eventually prevailed, however, and hops were first grown in England in 1524, 100 years before the first gardens were established in North America. Although selection of improved varieties must have been a continuous process for most of the second millennium, the breeding of hops as an organized, scientific operation dates from the start of the twentieth century with a program initiated at Wye College, England, in 1904. In the same year, the alpha-acid humulone was first isolated as a crystalline solid, and during the next 60 years our knowledge of hop chemistry and understanding of the isomerization process was developed, leading to great benefits for breeders, growers, and brewers alike. Over the last 40 years, there has been a rapid proliferation of types of processed hops, or hop products, which offer the brewer several economic and quality advantages over the use of whole hops, and the contribution of hops to beer aroma, bitterness, foam, and light stability can now be controlled more effectively than ever before.
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    • Okada, Y., Ito, K., 2001a. Cloning and analysis of valerophenone synthase gene expressed specifically in lupulin gland of hop (Humulus lupulus L.). Bioscience, Biotechnology and Biochemistry 65, 150-155.
         Resin and essential oil derived from hop (Humulus lupulus L.) cones are very important compounds for beer brewing, and they specifically accumulate in the lupulin gland of hop cones, In order to identify the genes responsible for the biosynthetic pathway of these compounds and use the identified genes for hop breeding using Marker Assisted Selection and transformation techniques, genes expressed specifically in the lupulin gland were cloned and sequenced. One of them was suggested to be similar to the chalcone synthase gene from the DNA sequence. The translation product of the gene had the activity of valerophenone synthase, which catalyzes a part of the synthesis reaction of alpha -acid and beta -acid, Northern analysis showed that the valerophenone synthase gene seemed to be expressed specifically in the lupulin gland.
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    • Okada, Y., Sano, Y., Kaneko, T., Abe, I., Noguchi, H., Ito, K., 2004. Enzymatic reactions by five chalcone synthase homologs from hop (Humulus lupulus L.). Bioscience, Biotechnology and Biochemistry 68, 1142-1145.
      The enzyme activities encoded in five cDNAs for chalcone synthase (CHS) homologs from hop were investigated. Only valerophenone synthase (VPS) and CHS_H1 showed both naringenin-chalcone and phlorisovalerophenone forming activity. Naringenin-chalcone production by VPS was much lower than by CHS_H1. Therefore, it is highly possible that flavonoid depends mainly on CHS_H1, while bitter acid biosynthesis depends mainly on VPS and CHS_H1.
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    • Okada, Y., Yamazaki, Y., Suh, D.-Y., Sankawa, U., Ito, K., 2001b. Bifunctional activities of valerophenone synthase in hop (Humulus lupulus L.). Journal of the American Society of Brewing Chemists 59, 163-166.
      Valerophenone synthase (VPS) catalyzes the biosynthesis of phlorisovalerophenone, which is a precursor of hop (Humulus lupulus L.) resin. The VPS gene is specifically expressed in the lupulin gland, and the enzyme has a high similarity to chalcone synthase (CHS). CHS catalyzes the formation of naringenin-chalcone; it is considered a precursor of the prenylflavonoids, which accumulate in the lupulin gland. We tried to confirm whether VPS has CHS activity using the purified translation product of the VPS gene expressed in Escherichia coli. The results indicated that VPS had CHS activity and that the enzyme activity of VPS was about six times stronger than the CHS activity. Therefore, VPS seems to contribute to the biosynthesis of both resin and the prenylflavonoids in the lupulin gland, and the difference in the bifunctional activities of VPS might have some effect on the relative amounts of resin and prenylflavonoid in the gland. Furthermore, we investigated (by Southern analysis) the existence of CHS genes, which contribute to the polyphenol biosynthesis in the bract and bracteole. We confirmed that there are two types of VPS genes, and also more than two other types of genes, that have high similarity to the VPS gene and might be the CHS gene.

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    • Paniego, N. B., Zuurbier, K. W. M., Fung, S.-Y., Van der Heijden, R., Scheffer, J. J. C., Verpoorte, R., 1999. Phlorisovalerophenone synthase, a novel polyketide synthase from hop (Humulus lupulus L.) cones. European Journal of Biochemistry 262, 612-616.
         Phlorisovalerophenone synthase (VPS), a novel aromatic polyketide synthase, was purified to homogeneity from 4.2 mg protein extract obtained from hop (Humulus lupulus L.) cone glandular hairs. The enzyme uses isovaleryl-CoA or isobutyryl-CoA and three molecules of malonyl-CoA to form phlorisovalerophenone or phlorisobutyrophenone, intermediates in the biosynthesis of the hop bitter acids (alpha- and beta-acids). VPS is an homodimeric enzyme, with subunits of 45 kDa. The pI of the enzyme was 6.1. Km values of 4 µM for isovaleryl-CoA, 10 µM for isobutyryl-CoA and 33 µM for malonyl-CoA, were found. The amino- acid sequences of two peptides, obtained by digestion of VPS, showed that the enzyme is highly homologous to plant chalcone synthases. The functional and structural relationship between VPS and other aromatic polyketide synthases is discussed.
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    • Raharjo, T. J., Chang, W. T., Verberne, M. C., Peltenburg-Looman, A. M. G., Linthorst, H. J. M., Verpoorte, R., 2004. Cloning and over-expression of a cDNA encoding a polyketide synthase from Cannabis sativa. Plant Physiology and Biochemistry 42, 291-297.
      A polyketide synthase has been suggested to play an important role in cannabinoid biosynthesis in Cannabis sativa L. This enzyme catalyzes the biosynthesis of olivetolic acid, one of the precursors for cannabinoid biosynthesis. Using a reverse transcriptase-polymerase chain reaction (RT-PCR) based on the DNA homology of chalcone synthase (EC 2.3.1.156) and valerophenone synthase (EC 2.3.1.156) of hop (Humulus lupulus), a cDNA encoding a polyketide synthase in C. sativa was identified. The coding region of the gene is 1170 bp long encoding a 389 amino acid protein of a predicted 42.7 kDa molecular mass and with a pI of 6.04. The gene shares a high homology with a chalcone synthase gene of H. lupulus, 85% and 94% homology on the level of DNA and protein, respectively. Over-expression of the construct in Escherichia coli M15 resulted in a 45 kDa protein. The protein has chalcone synthase activity as well as valerophenone synthase activity, a chalcone synthase-like activity. Using n-hexanoyl-CoA and malonyl-CoA as substrates did not give olivetol or olivetolic acid as a product.
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    • Schüz, R., Heller, W., Hahlbrock, K., 1983. Substrate specificity of chalcone synthase from Petroselinum hortense. Formation of phloroglucinol derivatives from aliphatic substrates. Journal of Biological Chemistry 258, 6730-6734.
      The substrate specificity of chalcone synthase, the key enzyme of flavonoid biosynthesis, was investigated. A purified enzyme preparation from cell suspension cultures of parsley (P. hortense) catalyzed chain elongations with acetate units from malonyl-CoA, using various aromatic and aliphatic CoA esters as starter molecules. Malonyl-CoA could not be replaced by malonyl acyl carrier protein in the standard chalcone synthase assay. Butyryl-CoA, hexanoyl-CoA and benzoyl-CoA served as substrates for the condensation reaction with similar efficiency as 4- coumaroyl-CoA, the natural substrate of the enzyme. Acetyl-CoA and octanoyl-CoA were relatively poor substrates. Among the products formed with the 2 most efficient aliphatic substrates tested, butyryl-CoA and hexanoyl-CoA, were the respective chalcone analogs, phlorobutyrophenone and phlorocaprophenone. Chalcone synthase and the corresponding enzyme of fatty acid synthesis in higher plants, beta-ketoacyl-acyl carrier protein synthase, may have a common evolutionary origin.
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    • Yamazaki, Y., Suh, D.-Y., Sitthithaworn, W., Ishiguro, K., Kobayashi, Y., Shibuya, M., Ebizuka, Y., Sankawa, U., 2001. Diverse chalcone synthase superfamily enzymes from the most primitive vascular plant, Psilotum nudum. Planta 214, 75-84.
      Psilotum nudum Griseb is a pteridophyte and belongs to the single family (Psilotaceae) of the division, Psilophyta. Being the only living species of a once populated division, P. nudum is the most primitive vascular plant. Chalcone synthase (CHS; EC 2.3.1.74) superfamily enzymes are responsible for biosyntheses of diverse secondary metabolites, including flavonoids and stilbenes. Using a reverse transcription-polymerase chain reaction strategy, four CHS-superfamily enzymes (PnJ, PnI, PnL and PnP) were cloned from P. nudum, and heterologously expressed in Escherichia coli. These four enzymes of 396-406 amino acids showed sequence identity of >50% among themselves and to other higher-plant CHS-superfamily enzymes. PnJ and PnP preferred p-coumaroyl-CoA and isovaleryl-CoA, respectively, as starter CoA and catalyzed CHS-type ring formation, indicating that they are CHS and phloriso valerophenone synthase, respectively. On the other hand, PnI and PnL preferred cinnamoyl-CoA as starter CoA and catalyzed stilbene synthase-type cyclization and thus were determined to be pinosylvin synthases (EC 2.3.1.146). In addition, PnE, which uniquely contains a glutamine in place of otherwise strictly conserved histidine, had no apparent in vitro catalytic activity. Phylogenetic analysis indicated that these P. nudum clones form a separate cluster together with Equisetum arvense CHS. This cluster of pteridophytes is located next to the cluster formed by pine (gymnosperm) enzymes, in agreement with their evolutionary relationships. Psilotum nudum represents a plant with the most diverse CHS-superfamily enzymes and this ability to diverge may have provided a survival edge during evolution.
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    • Zuurbier, K. W. M., Fung, S.-Y., Scheffer, J. J. C., Verpoorte, R., 1995. Formation of aromatic intermediates in the biosynthesis of bitter acids in Humulus lupulus. Phytochemistry 38, 77-82.
      A new hypothesis concerning the formation of aromatic intermediates in the biosynthesis of hop bitter acids was tested. Two phloroglucinol derivatives, 2-(3-methylbutanoyl)-1,3,5-benzenetriol (phlorisovalerophenone = PIVP) and 2-(2- methylpropanoyl)-1,3,5-benzenetriol (phlorisobutyrophenone = PIBP), were detected in hop extracts. The formation of these compounds was shown to occur in vitro in hop protein extracts using the precursors malonyl-CoA plus isovaleryl-CoA or isobutyryl-CoA, respectively. We conclude that PIVP and PIBP are probably the first aromatic intermediates formed in the biosynthesis of humulone/lupulone and cohumulone/colupulone, respectively. We suggest that the reactions are catalyzed by a chalcone synthase-like enzyme. The enzyme chalcone synthase and its activity were found to be present in hop protein extracts. The formation of naringenin, PIVP and PIBP in various hop protein extracts obtained during the development from flower bud to ripe cone was compared.
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    • Zuurbier, K. W. M., Leser, J., Berger, T., Hofte, A. J. P., Schröder, G., Verpoorte, R., Schröder, J., 1998. 4-Hydroxy-2-pyrone formation by chalcone and stilbene synthase with nonphysiological substrates. Phytochemistry 49, 1945-1951.
          Valerophenone synthase (VPS) is a polyketide synthase that catalyzes the formation of the phloroglucinol derivatives in the synthesis of the bitter acids in hop (Humulus lupulus). The reaction uses isovaleryl-CoA or isobutyryl-CoA, but otherwise it is identical to that of the chalcone synthase in flavonoid biosynthesis. Our study showed that chalcone synthase can perform the function of VPS, but not perfectly, because the majority of the reactions terminated after two condensation reactions (products: 4-hydroxy-2-pyrone derivatives). The same experiments with stilbene synthase yielded exclusively the 4-hydroxy-2-pyrone derivatives, not the products expected from three condensation reactions. The results are discussed in the context of the functional diversity and evolution in the family of CHS-related polyketide synthases.
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CHS-Typ Ring-Faltung, aber andere Substrate


 

File History:

  • 25.08.2010: Addition of abstracts to citations

  • 31.05.2009: Figures redrawn

 

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